LM-GlycoRepo

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About LM-GlycoRepo

LM-GlycoRepo is a repository for lectin-assisted multimodal data. The current version (ver.1.0) is specialized for mouse tissue glycome mapping data obtained by laser microdissection (LMD)-assisted lectin microarray (LMA) (Zou et al. Sci Rep 2017). Users can deposit data sets of LMD images, LMA data, and high-resolution histological images including staining images with multiple lectins on the array. As this repository system is implemented based on GlycoPOST, users can deposit such data sets with a unique identifier for the paper publication and suspend (or "embargo") until their paper is published. After the release date set by users, the deposited data will be visible at a visualization tool called LM-GlycomeAtlas.
Please see [more details] for relevant information including references.

This system has been tested on Windows 10 Chrome. Please ensure that pop-up blockers are disabled.

Submission conditions are in accordance with the Minimum Information Required for a Glycomics Experiment (MIRAGE) guidelines.

MIRAGE logo

Acknowledgements:

This repository system was implemented based on GlycoPOST.
GlycoPOST logo

Reference:

Nagai-Okatani C, Fujita N, Boottanun P, Tanaka M, Shiota M, Shinmachi D, Angata K, Aoki-Kinoshita K, Kuno A. LM-GlycoRepo Version 1.0: A novel repository system for mouse tissue glycome mapping data. (submitted) doi:10.1101/2025.03.18.644044 *preprint

Statistics

4 project are registered. 4 are opened.

Data list

Search project

"C57BL/6J" "Liver" etc.

ID Project title Species Group Tissue No. of lectin array data No. of staining images Publication Principal investigator Announcement date
1 Reference 1 Mouse C57BL/6J Pancreas, Heart, Lung, Thymus, Gallbladder, Stomach, Small Bowel, Colon, Skin 234 0 10.3390/molecules24162962 Admin, National Institute of Advanced Industrial Science and Technology 2019/8/15
2 Reference 2 Mouse C57BL/6J Brain, Kidney, Liver, Spleen, Testis 182 0 10.1038/srep43560 Admin, National Institute of Advanced Industrial Science and Technology 2017/3/6
3 Reference 3 Mouse Normal, Dilated cardiomyopathy Heart 27 42 10.1038/s41374-019-0279-9 Admin, National Institute of Advanced Industrial Science and Technology 2019/6/28
4 Reference 4 Mouse 2-month-age, 14-month-age, 23-month-age Heart 66 0 10.1016/j.reth.2022.12.009 Admin, National Institute of Advanced Industrial Science and Technology 2022/12/22

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