About LM-GlycoRepo
LM-GlycoRepo is a repository for lectin-assisted multimodal data.
The current version (ver.1.0) is specialized for mouse tissue glycome mapping data obtained by laser microdissection (LMD)-assisted lectin microarray (LMA) (Zou et al. Sci Rep 2017).
Users can deposit data sets of LMD images, LMA data, and high-resolution histological images including staining images with multiple lectins on the array.
As this repository system is implemented based on GlycoPOST, users can deposit such data sets with a unique identifier for the paper publication and suspend (or "embargo") until their paper is published.
After the release date set by users, the deposited data will be visible at a visualization tool called LM-GlycomeAtlas.
Please see [more details] for relevant information including references.
This system has been tested on Windows 10 Chrome. Please ensure that pop-up blockers are disabled.
Submission conditions are in accordance with the Minimum Information Required for a Glycomics Experiment (MIRAGE) guidelines.
Acknowledgements:
This repository system was implemented based on GlycoPOST.
Reference:
Nagai-Okatani C, Fujita N, Boottanun P, Tanaka M, Shiota M, Shinmachi D, Angata K, Aoki-Kinoshita K, Kuno A. LM-GlycoRepo Version 1.0: A novel repository system for mouse tissue glycome mapping data. (submitted) doi:10.1101/2025.03.18.644044 *preprint
Statistics
| 5 project are registered. 3 are opened. |
Data list
Search project
"C57BL/6J" "Liver" etc.
| ID | Species | Group | Tissue | No. of |
No. of |
Publication | Announcement date | |||
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | Mouse | C57BL/6J | Pancreas, Heart, Lung, Thymus, Gallbladder, Stomach, Small Bowel, Colon, Skin | 234 | 0 | 10.3390/molecules24162962 | 2019/8/15 | |||
| 2 | Mouse | C57BL/6J | Brain, Kidney, Liver, Spleen, Testis | 182 | 0 | 10.1038/srep43560 | 2017/3/6 | |||
| 3 | Mouse | Normal, Dilated cardiomyopathy | Heart | 27 | 42 | 10.1038/s41374-019-0279-9 | 2025/4/3 |
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